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Numerical P system and Enzymatic Numerical P system simulator, written in Python 3 (with branch compatible for Python 2)

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PeP (Enzymatic) Numerical P System simulator written in Python 3 (with branch for Python 2).

Command line usage

python2 pep.py INPUT_FILE_NAME.pep [OPTIONS]

where OPTIONS can be:

  • --step: require the user to press enter after befor running the next simulation step;
  • -n NUMBER: stop the simulation after n simulation steps;
  • --csv: write a .csv document at the end of the simulation that contains the values of each variable at each simulation step;
  • --debug: increase verbosity by showing DEBUG messages
  • --error: reduce verbosity by showing only ERROR messages This is the python 2 compatible branch

If colorlog is installed, then messages will be coloured according to the level of importance.

Authors

Andrei George Florea, Cătălin Buiu

Department of Automatic Control And Systems Engineering,

Politehnica University of Bucharest

Bucharest, Romania.

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Numerical P system and Enzymatic Numerical P system simulator, written in Python 3 (with branch compatible for Python 2)

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